org.bch.fhir.i2b2.service

Class PatientToI2B2

java.lang.Object

org.bch.fhir.i2b2.service.FHIRToPDO

org.bch.fhir.i2b2.service.PatientToI2B2

public class PatientToI2B2
extends FHIRToPDO

Generates the i2b2 pdo xml equivalent for fhir Patient resource

Author:

CHIP-IHL

Field Summary

Fields

Modifier and Type	Field and Description
static java.lang.String	SEP

Fields inherited from class org.bch.fhir.i2b2.service.FHIRToPDO

DEFAULT_EVENT_SOURCE, DEFAULT_PATIENT_SOURCE, eventIde, eventIdeSource, FHIR_TAG_VALUE_BOOLEAN, FHIR_TAG_VALUE_CODING, FHIR_TAG_VALUE_DECIMAL, FHIR_TAG_VALUE_INTEGER, FHIR_TAG_VALUE_QUANTITY, FHIR_TAG_VALUE_STRING, METADATA_CONCEPT_CD, patientIde, patientIdeSource

Constructor Summary

Constructors

Constructor and Description
PatientToI2B2()

Method Summary

Methods

Modifier and Type	Method and Description
protected ElementSet	generatePatientSet(ca.uhn.fhir.model.dstu2.resource.Patient patient)
java.lang.String	getPDOXML(ca.uhn.fhir.model.dstu2.resource.BaseResource resource) Override method that implements FHIRToPDO.getPDOXML(BaseResource)

Methods inherited from class org.bch.fhir.i2b2.service.FHIRToPDO

addMetadataInObservationSet, findResourceById, finishRow, generateEIDSet, generateEventSet, generatePatientSet, generatePIDSet, generateRow, generateRow, generateRow, generateRow, genParamNum, genParamStr, getEventId, isNumericType, isRawConceptCD

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

SEP

public static final java.lang.String SEP

See Also:

Constant Field Values

Constructor Detail

PatientToI2B2

public PatientToI2B2()

Method Detail

getPDOXML

public java.lang.String getPDOXML(ca.uhn.fhir.model.dstu2.resource.BaseResource resource)
                           throws FHIRI2B2Exception

Override method that implements FHIRToPDO.getPDOXML(BaseResource)

Specified by:

getPDOXML in class FHIRToPDO

Parameters:

resource - The fhir resource. It must be a Patient resource

Returns:

The pdo xml as String

Throws:

FHIRI2B2Exception - In case some error occurs

generatePatientSet

protected ElementSet generatePatientSet(ca.uhn.fhir.model.dstu2.resource.Patient patient)
                                 throws FHIRI2B2Exception

Throws:

FHIRI2B2Exception